Tom Chou

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 5	2017

Other Publications

Article	Year
Ribosome recycling, diffusion, and mRNA loop formation in translational regulation. Biophysical journal\| PubMed ID: 12885626	2003
Interplay of chemotaxis and chemokinesis mechanisms in bacterial dynamics. Physical review. E, Statistical, nonlinear, and soft matter physics\| PubMed ID: 14525024	2003
Chiral molecule adsorption on helical polymers. Physical review. E, Statistical, nonlinear, and soft matter physics\| PubMed ID: 14995481	2004
Water alignment, dipolar interactions, and multiple proton occupancy during water-wire proton transport. Biophysical journal\| PubMed ID: 15111400	2004
Physical mechanisms of gas and perfluoron retinopexy and sub-retinal fluid displacement. Physics in medicine and biology\| PubMed ID: 15285260	2004
Physics of RecA-mediated homologous recognition. Biophysical journal\| PubMed ID: 15345529	2004
Modeling the emergence of the 'hot zones': tuberculosis and the amplification dynamics of drug resistance. Nature medicine\| PubMed ID: 15378053	2004
Clustered bottlenecks in mRNA translation and protein synthesis. Physical review letters\| PubMed ID: 15600884	2004
Steady-state properties of a totally asymmetric exclusion process with periodic structure. Physical review. E, Statistical, nonlinear, and soft matter physics\| PubMed ID: 15697576	2005
First passage times of driven DNA hairpin unzipping. Physical biology\| PubMed ID: 16224122	2005
First passage and cooperativity of queuing kinetics. Physical review letters\| PubMed ID: 16383812	2005
Band gaps and the Kelvin-Helmholtz instability. Physical review. E, Statistical, nonlinear, and soft matter physics\| PubMed ID: 17358261	2007
Stochastic entry of enveloped viruses: fusion versus endocytosis. Biophysical journal\| PubMed ID: 17513379	2007
Multistage adsorption of diffusing macromolecules and viruses. The Journal of chemical physics\| PubMed ID: 17867780	2007
Dynamic boundaries in asymmetric exclusion processes. Physical review. E, Statistical, nonlinear, and soft matter physics\| PubMed ID: 17930227	2007
Peeling and sliding in nucleosome repositioning. Physical review letters\| PubMed ID: 17930799	2007
Brownian ratchets driven by asymmetric nucleation of hydrolysis waves. Physical review letters\| PubMed ID: 18233496	2007
Degenerate ground-state lattices of membrane inclusions. Physical review. E, Statistical, nonlinear, and soft matter physics\| PubMed ID: 18763950	2008
Membrane lipid segregation in endocytosis. Physical review. E, Statistical, nonlinear, and soft matter physics\| PubMed ID: 18850866	2008
Exact steady-state velocity of ratchets driven by random sequential adsorption. Journal of physics A: Mathematical and general\| PubMed ID: 19081764	2007
Charge-transport-mediated recruitment of DNA repair enzymes. The Journal of chemical physics\| PubMed ID: 19102557	2008
Mechanisms of receptor/coreceptor-mediated entry of enveloped viruses. Biophysical journal\| PubMed ID: 19348746	2009
Elite suppressor-derived HIV-1 envelope glycoproteins exhibit reduced entry efficiency and kinetics. PLoS pathogens\| PubMed ID: 19360131	2009
Accelerated search kinetics mediated by redox reactions of DNA repair enzymes. Biophysical journal\| PubMed ID: 19450467	2009
Enhancement of cargo processivity by cooperating molecular motors. Physical chemistry chemical physics : PCCP\| PubMed ID: 19506760	2009
Enhancement of charged macromolecule capture by nanopores in a salt gradient. The Journal of chemical physics\| PubMed ID: 19624217	2009
A quantitative affinity-profiling system that reveals distinct CD4/CCR5 usage patterns among human immunodeficiency virus type 1 and simian immunodeficiency virus strains. Journal of virology\| PubMed ID: 19692480	2009
Optimal cytoplasmic transport in viral infections. PloS one\| PubMed ID: 20046829	2009
Models of dynamic extraction of lipid tethers from cell membranes. Physical biology\| PubMed ID: 20453295	2010
Frequency-dependent chemolocation and chemotactic target selection. Physical biology\| PubMed ID: 20453297	2010
A mathematical model of intercellular signaling during epithelial wound healing. Journal of theoretical biology\| PubMed ID: 20685318	2010
Diffusion-dependent mechanisms of receptor engagement and viral entry. The journal of physical chemistry. B\| PubMed ID: 21038861	2010
Coarsening and accelerated equilibration in mass-conserving heterogeneous nucleation. Physical review. E, Statistical, nonlinear, and soft matter physics\| PubMed ID: 21867184	2011
Tracking monotonically advancing boundaries in image sequences using graph cuts and recursive kernel shape priors. IEEE transactions on medical imaging\| PubMed ID: 22156978	2012
A mechanical model of retinal detachment. Physical biology\| PubMed ID: 22733081	2012
Affinofile profiling: how efficiency of CD4/CCR5 usage impacts the biological and pathogenic phenotype of HIV. Virology\| PubMed ID: 23217618	2013
First passage times in homogeneous nucleation and self-assembly. The Journal of chemical physics\| PubMed ID: 23277928	2012
Measurement of the optic disc vertical tilt angle with spectral-domain optical coherence tomography and influencing factors. American journal of ophthalmology\| PubMed ID: 23891337	2013
Combinatoric analysis of heterogeneous stochastic self-assembly. The Journal of chemical physics\| PubMed ID: 24089730	2013
Recidivism and rehabilitation of criminal offenders: a carrot and stick evolutionary game. PloS one\| PubMed ID: 24454884	2014
Iterative graph cuts for image segmentation with a nonlinear statistical shape prior. Journal of mathematical imaging and vision\| PubMed ID: 24678141	2014
Influence of correction of ocular magnification on spectral-domain OCT retinal nerve fiber layer measurement variability and performance. Investigative ophthalmology & visual science\| PubMed ID: 24781941	2014
Distinct HIV-1 entry phenotypes are associated with transmission, subtype specificity, and resistance to broadly neutralizing antibodies. Retrovirology\| PubMed ID: 24957778	2014
Influence of the disc-fovea angle on limits of RNFL variability and glaucoma discrimination. Investigative ophthalmology & visual science\| PubMed ID: 25301880	2014
Fixation times in differentiation and evolution in the presence of bottlenecks, deserts, and oases. Journal of theoretical biology\| PubMed ID: 25744205	2015
First assembly times and equilibration in stochastic coagulation-fragmentation. The Journal of chemical physics\| PubMed ID: 26156470	2015
Bayesian Uncertainty Quantification for Bond Energies and Mobilities Using Path Integral Analysis. Biophysical journal\| PubMed ID: 26331254	2015
Mechanisms of blood homeostasis: lineage tracking and a neutral model of cell populations in rhesus macaques. BMC biology\| PubMed ID: 26486451	2015
Kinetic theory of age-structured stochastic birth-death processes. Physical review. E\| PubMed ID: 26871029	2016
Onset, timing, and exposure therapy of stress disorders: mechanistic insight from a mathematical model of oscillating neuroendocrine dynamics. Biology direct\| PubMed ID: 27013324	2016
Quantifying the Sensitivity of HIV-1 Viral Entry to Receptor and Coreceptor Expression. The journal of physical chemistry. B\| PubMed ID: 27137677	2016
Swarming in viscous fluids: Three-dimensional patterns in swimmer- and force-induced flows. Physical review. E\| PubMed ID: 27176395	2016
A Hierarchical Kinetic Theory of Birth, Death and Fission in Age-Structured Interacting Populations. Journal of statistical physics\| PubMed ID: 27335505	2016