Zhen Chen

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JoVE Journal Publications

ArticleTotal : 3	Year
Publication title	2025
Publication title	2026
Publication title	2026

Other Publications

Article	Year
Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition). Autophagy\| PubMed ID: 26799652	2016
Epigenetic Regulation: A New Frontier for Biomedical Engineers. Annual review of biomedical engineering\| PubMed ID: 28301736
LINC00341 exerts an anti-inflammatory effect on endothelial cells by repressing VCAM1. Physiological genomics\| PubMed ID: 28500253
MicroRNA-92a Mediates Endothelial Dysfunction in CKD. Journal of the American Society of Nephrology : JASN\| PubMed ID: 28696247	2017
Systems biology analysis of longitudinal functional response of endothelial cells to shear stress. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 28973892
Enhancer-associated long non-coding RNA LEENE regulates endothelial nitric oxide synthase and endothelial function. Nature communications\| PubMed ID: 29348663
Abnormalities of vascular histology and collagen fiber configuration in patients with advanced chronic kidney disease. The journal of vascular access\| PubMed ID: 29742957
Rainbow-Seq: Combining Cell Lineage Tracing with Single-Cell RNA Sequencing in Preimplantation Embryos. iScience\| PubMed ID: 30267678
Long Non-Coding RNA Modulation of VEGF-A during Hypoxia. Non-coding RNA\| PubMed ID: 30463374
Genome-wide colocalization of RNA-DNA interactions and fusion RNA pairs. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 30718424
Epigenetic Risk Profile of Diabetic Kidney Disease in High-Risk Populations. Current diabetes reports\| PubMed ID: 30730019
Epigenetic profiling with ultralow DNA amounts. Nature biomedical engineering\| PubMed ID: 31015721
Differential gene expression and AKT targeting in triple negative breast cancer. Oncotarget\| PubMed ID: 31320990
Extracellular MicroRNA-92a Mediates Endothelial Cell-Macrophage Communication. Arteriosclerosis, thrombosis, and vascular biology\| PubMed ID: 31597449
Mapping RNA-chromatin interactions by sequencing with iMARGI. Nature protocols\| PubMed ID: 31619811
CASE (CemiplimAb-rwlc Survivorship and Epidemiology) study in advanced cutaneous squamous cell carcinoma. Future oncology (London, England)\| PubMed ID: 31951149
Reply to Hartl and Gao: Lack of between-batch difference in the distributions of measured extracellular RNA levels. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 31964851
Endothelial mechanobiology. APL bioengineering\| PubMed ID: 32095737
Presymptomatic Increase of an Extracellular RNA in Blood Plasma Associates with the Development of Alzheimer's Disease. Current biology : CB\| PubMed ID: 32220323
Suppression of Endothelial AGO1 Promotes Adipose Tissue Browning and Improves Metabolic Dysfunction. Circulation\| PubMed ID: 32393053
Circulating microRNA changes in patients with impaired glucose regulation. Adipocyte\| PubMed ID: 32752917
Reply to Verwilt et al.: Experimental evidence against DNA contamination in SILVER-seq. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 32788395
Natural display of nuclear-encoded RNA on the cell surface and its impact on cell interaction. Genome biology\| PubMed ID: 32907628
Stress-induced RNA-chromatin interactions promote endothelial dysfunction. Nature communications\| PubMed ID: 33060583
Longitudinal shear stress response in human endothelial cells to atheroprone and atheroprotective conditions. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 33468662
RAMP2-AS1 Regulates Endothelial Homeostasis and Aging. Frontiers in cell and developmental biology\| PubMed ID: 33644072
Different Training Durations and Frequencies of Tai Chi for Bone Mineral Density Improvement: A Systematic Review and Meta-Analysis. Evidence-based complementary and alternative medicine : eCAM\| PubMed ID: 33815557	2021
Modic Changes Increase the Cage Subsidence Rate in Spinal Interbody Fusion Surgery: A Systematic Review and Network Meta-Analysis. World neurosurgery\| PubMed ID: 37865194	2024
Anterior Cervical Discectomy and Fusion with Zero-Profile Anchored Spacer Versus Plate and Cage for 3-Level Contiguous Cervical Degenerative Disease: A Systematic Review and Meta-Analysis. World neurosurgery\| PubMed ID: 39033809	2024
Exploiting omic-based approaches to decipher Traditional Chinese Medicine. Journal of ethnopharmacology\| PubMed ID: 39413937	2025
Cross-Cultural Adaptation and Validation of the Mandarin Chinese Version of the Vocal Performance Questionnaire. Journal of voice : official journal of the Voice Foundation\| PubMed ID: 39870559	2025
miR302a inhibits the proliferation of esophageal cancer cells through the MAPK and PI3K/Akt signaling pathways. Oncology letters\| PubMed ID: 29456742	2018
Optimized Kinetics Match and Charge Balance Toward Potassium Ion Hybrid Capacitors with Ultrahigh Energy and Power Densities. Small (Weinheim an der Bergstrasse, Germany)\| PubMed ID: 32985107	2020
Fluvastatin attenuated ischemia/reperfusion-induced autophagy and apoptosis in cardiomyocytes through down-regulation HMGB1/TLR4 signaling pathway. Molecular biology reports\| PubMed ID: 34032975	2021
Circ-PGC increases the expression of FOXR2 by targeting miR-532-3p to promote the development of non-small cell lung cancer. Cell cycle (Georgetown, Tex.)\| PubMed ID: 34494941	2021
Prognostic Nomogram and Therapeutic Option of Cancer-Specific Death in the Patients with Metachronous Second Primary Lung Cancer. Journal of oncology\| PubMed ID: 35087587	2022
Lymphocytic interstitial pneumonia presenting with a ground glass nodule: A case report and literature review. Medicine\| PubMed ID: 37144997	2023
Delta-radiomics features for predicting the major pathological response to neoadjuvant chemoimmunotherapy in non-small cell lung cancer. European radiology\| PubMed ID: 37736804	2024
Development of an immune-related gene signature applying Ridge method for improving immunotherapy responses and clinical outcomes in lung adenocarcinoma. PeerJ\| PubMed ID: 40352269	2025
Bergenin exerts anti-cancer activity in hepatocellular carcinoma via the PI3K/Akt/mTOR and MAPK/ERK pathways. Journal of molecular histology\| PubMed ID: 40615733	2025
Black palladium nanoparticle-based lateral flow immunoassay for cardiovascular disease diagnosis. RSC advances\| PubMed ID: 40365198	2025

Article	Year
Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition). Autophagy\| PubMed ID: 26799652	2016
Epigenetic Regulation: A New Frontier for Biomedical Engineers. Annual review of biomedical engineering\| PubMed ID: 28301736
LINC00341 exerts an anti-inflammatory effect on endothelial cells by repressing VCAM1. Physiological genomics\| PubMed ID: 28500253
MicroRNA-92a Mediates Endothelial Dysfunction in CKD. Journal of the American Society of Nephrology : JASN\| PubMed ID: 28696247	2017
Systems biology analysis of longitudinal functional response of endothelial cells to shear stress. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 28973892
Enhancer-associated long non-coding RNA LEENE regulates endothelial nitric oxide synthase and endothelial function. Nature communications\| PubMed ID: 29348663
Abnormalities of vascular histology and collagen fiber configuration in patients with advanced chronic kidney disease. The journal of vascular access\| PubMed ID: 29742957
Rainbow-Seq: Combining Cell Lineage Tracing with Single-Cell RNA Sequencing in Preimplantation Embryos. iScience\| PubMed ID: 30267678
Long Non-Coding RNA Modulation of VEGF-A during Hypoxia. Non-coding RNA\| PubMed ID: 30463374
Genome-wide colocalization of RNA-DNA interactions and fusion RNA pairs. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 30718424
Epigenetic Risk Profile of Diabetic Kidney Disease in High-Risk Populations. Current diabetes reports\| PubMed ID: 30730019
Epigenetic profiling with ultralow DNA amounts. Nature biomedical engineering\| PubMed ID: 31015721
Differential gene expression and AKT targeting in triple negative breast cancer. Oncotarget\| PubMed ID: 31320990
Extracellular MicroRNA-92a Mediates Endothelial Cell-Macrophage Communication. Arteriosclerosis, thrombosis, and vascular biology\| PubMed ID: 31597449
Mapping RNA-chromatin interactions by sequencing with iMARGI. Nature protocols\| PubMed ID: 31619811
CASE (CemiplimAb-rwlc Survivorship and Epidemiology) study in advanced cutaneous squamous cell carcinoma. Future oncology (London, England)\| PubMed ID: 31951149
Reply to Hartl and Gao: Lack of between-batch difference in the distributions of measured extracellular RNA levels. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 31964851
Endothelial mechanobiology. APL bioengineering\| PubMed ID: 32095737
Presymptomatic Increase of an Extracellular RNA in Blood Plasma Associates with the Development of Alzheimer's Disease. Current biology : CB\| PubMed ID: 32220323
Suppression of Endothelial AGO1 Promotes Adipose Tissue Browning and Improves Metabolic Dysfunction. Circulation\| PubMed ID: 32393053
Circulating microRNA changes in patients with impaired glucose regulation. Adipocyte\| PubMed ID: 32752917
Reply to Verwilt et al.: Experimental evidence against DNA contamination in SILVER-seq. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 32788395
Natural display of nuclear-encoded RNA on the cell surface and its impact on cell interaction. Genome biology\| PubMed ID: 32907628
Stress-induced RNA-chromatin interactions promote endothelial dysfunction. Nature communications\| PubMed ID: 33060583
Longitudinal shear stress response in human endothelial cells to atheroprone and atheroprotective conditions. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 33468662
RAMP2-AS1 Regulates Endothelial Homeostasis and Aging. Frontiers in cell and developmental biology\| PubMed ID: 33644072
Different Training Durations and Frequencies of Tai Chi for Bone Mineral Density Improvement: A Systematic Review and Meta-Analysis. Evidence-based complementary and alternative medicine : eCAM\| PubMed ID: 33815557	2021
Modic Changes Increase the Cage Subsidence Rate in Spinal Interbody Fusion Surgery: A Systematic Review and Network Meta-Analysis. World neurosurgery\| PubMed ID: 37865194	2024
Anterior Cervical Discectomy and Fusion with Zero-Profile Anchored Spacer Versus Plate and Cage for 3-Level Contiguous Cervical Degenerative Disease: A Systematic Review and Meta-Analysis. World neurosurgery\| PubMed ID: 39033809	2024
Exploiting omic-based approaches to decipher Traditional Chinese Medicine. Journal of ethnopharmacology\| PubMed ID: 39413937	2025
Cross-Cultural Adaptation and Validation of the Mandarin Chinese Version of the Vocal Performance Questionnaire. Journal of voice : official journal of the Voice Foundation\| PubMed ID: 39870559	2025
miR302a inhibits the proliferation of esophageal cancer cells through the MAPK and PI3K/Akt signaling pathways. Oncology letters\| PubMed ID: 29456742	2018
Optimized Kinetics Match and Charge Balance Toward Potassium Ion Hybrid Capacitors with Ultrahigh Energy and Power Densities. Small (Weinheim an der Bergstrasse, Germany)\| PubMed ID: 32985107	2020
Fluvastatin attenuated ischemia/reperfusion-induced autophagy and apoptosis in cardiomyocytes through down-regulation HMGB1/TLR4 signaling pathway. Molecular biology reports\| PubMed ID: 34032975	2021
Circ-PGC increases the expression of FOXR2 by targeting miR-532-3p to promote the development of non-small cell lung cancer. Cell cycle (Georgetown, Tex.)\| PubMed ID: 34494941	2021
Prognostic Nomogram and Therapeutic Option of Cancer-Specific Death in the Patients with Metachronous Second Primary Lung Cancer. Journal of oncology\| PubMed ID: 35087587	2022
Lymphocytic interstitial pneumonia presenting with a ground glass nodule: A case report and literature review. Medicine\| PubMed ID: 37144997	2023
Delta-radiomics features for predicting the major pathological response to neoadjuvant chemoimmunotherapy in non-small cell lung cancer. European radiology\| PubMed ID: 37736804	2024
Development of an immune-related gene signature applying Ridge method for improving immunotherapy responses and clinical outcomes in lung adenocarcinoma. PeerJ\| PubMed ID: 40352269	2025
Bergenin exerts anti-cancer activity in hepatocellular carcinoma via the PI3K/Akt/mTOR and MAPK/ERK pathways. Journal of molecular histology\| PubMed ID: 40615733	2025
Black palladium nanoparticle-based lateral flow immunoassay for cardiovascular disease diagnosis. RSC advances\| PubMed ID: 40365198	2025